FAQ
Stability Constants
Experimental Constants
Calculated Constants
Phreeqc Database
Toolkit for Calculation
Speciation
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Conformational Search
1. Input a compound
2. Searching parameters
3. Review & submit
4. Results & download
Analysis
1. Redo clustering
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Conformational search
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Step 1. Input a compound
The user has two options to input the structure of the molecule,
a)
Draw it with the plugin from PubChem. While drawing, the plugin will generate a SMILES code for your structure. Once finished, just
paste the SMILES code
to the frame on the right. Remember to
draw the point charge(s) explicitly
, if your compound is cation/anion/zwitterion!)
b)
Upload your own coordinates for the structure. Structures in xyz, pdb, sdf, and mol2 are supported.
NOTE:
The SMILES code is a simplified version of chemical notation, and it does not handle proton well. If protons are important in your structure, you'd better upload your own coordinates in xyz format.
Provide the SMILES of your molecule:
Draw it now
OR
Upload coordinates
Next